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• Advanced Genetics Wizard - Online program that calculates the distribution of offspring genotypes from dominant, codominant and recessive gene crosses, for up to 6 genes.
• Alice Software - Database system to build and publish synonymised checklists of species. Species descriptions include pre-established fields and detailed descriptions employing any number of user-defined fields.
• Applied Biosystems - Integrated software product designed to provide automation, high throughput, and high allele-calling accuracy for linkage mapping and human identification applications. Windows NT .
• Big Bench Software - Database application designed for transgenic mouse colonies. A complete colony management software solution for Macintosh . Downloadable demo version .
• Contentsoft AG - Offers microarray data mining software for Windows platform featuring double conjugated clustering and SVD sorting methods. Includes a free trial version.
• DRIFT - Graphically represents the effect of genetic drift on gene frequency of one or more populations for a single locus, two allele model in a closed population using stochastic simulation methods. The DOS program is free.
• Genetic Linkage Analysis - Offers links and other resources for genetic analysis software from The Rockefeller University.
• Genetic Network Maps as Java Applets - Genetic networks controlling development in Sea Urchin represented as Java applets. Formal scheme. Molecular interactions modelled as Petri Net.
• Genetics Software - RASA 2.2 and other Mac software for phylogenetics, comparative genomics, and sequence analysis - from Penn State University.
• GeneticStudio - A complete suite of population genetic analysis programs for MAC. Includes plugin modules.
• Hands on Genetics - Instructional software for basic genetics, such as DNA, PCR, Mendel, Hardy-Weinberg, meiosis and computer simulations. Download WIN and MAC demos and order online.
• High Performance Computing and Informatics Office - US National Institutes of Health site with extensive genetic linkage analysis application resources on high performance computer systems. Formerly the Computational Methods and Algorithms Group.
• Istituto di Genetica Biochimica ed Evoluzionistica - Program that performs a permutation-based statistical test to detect genetic divergence among populations from DNA fingerprinting data . Downloadable source Fortran code, executable files and user manual .
• Linkage Analysis Software List - Extensive list of linkage, mapping and pedigree software with links for obtaining copies.
• Locus Technology, Inc - Colony management, supports creation and tracking of research animals: transgenic and congenic lines, knockouts and outbred strains.
• MapPop - Software for selective mapping and bin mapping by Daniel Brown and Todd Vision. WIN version, documentation and references are available here.
• MuStaR Sequence Variant Database Software - Designed to create a database of mutation loci, to make this information available to as many people as possible.
• PopGen - Software that models population genetics with emphasis on genetic drift, selection, and migration.
• PowerSSR - Set of statistical methods for discrete genetic data analysis, designed especially for microsatellite data analysis. Includes downloadable versions for Windows and Linux.
• Progeny Software - Supply pedigree drawing and genetic data management software for genetic research with a built-in customizable relational database.
• Sewall Wright Institute - Linkage Links - Page of links to information and software for linkage and gene mapping.
• Statistical Genetics Software - Collection of primarily Fortan programs for genetic analysis. Requires registration to download.
• STRand - Open-source program to automate or speed up the analysis of DNA fragment length polymorphism samples run on fluorescence based gels . Instructions for use and program download available .
• TagSorter - Database application designed to simplify the collation, sorting, comparison and identification of SAGE tag sequences.
• The BioCatalog - Software directory of general interest in molecular biology and genetics.
• The Darwin Manual - Guide and list of commands used to run this programming language. Library contains programs to compute pairwise alignments, phylogenetic trees, multiple sequence alignments, and to make secondary structure predictions.
• Whitehead Institute Center for Genome Research - Follow the links for GeneHunter, MapMaker, Primer, and RHMapper documentation and free software, in UNIX and C source code.
• Search our Wiki for Genetics Software - Find more information about this subject by clicking here